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CPI

Installing and managing WordPress with WP-CLI from the command line on Ubuntu

September 10, 2017 by Simon

Here is a really simple way to manually manage WordPress installations on Ubuntu.

My previous WordPress (and related) guides

  • Setting up Google Analytics on your website
  • Deploying WordPress to a Vultr VM via command line
  • Add Google AdWords to your WordPress blog
  • Securing an Ubuntu VM with a free LetsEncrypt SSL certificate in 1 Minute
  • Improving the speed of WordPress
  • Optimize images automatically in WordPress
  • Essential WordPress Plugins
  • Why choose a WordPress website over a static HTML site edited with Dreamweaver
  • Building a WordPress site from scratch

My Server Setup Guides

  • Useful Linux Terminal Commands
  • Moving WordPress to a new self managed server away from CPanel
  • Setting up a Vultr VM and configuring it
  • Creating and configuring a CentOS server on Digital Ocean
  • How to buy a new domain and SSL cert from NameCheap, a Server from Digital Ocean and configure it.
  • Creating an AWS EC2 Ubuntu 14.04 server with NGINX, Node and MySQL and phpMyAdmin
  • The quickest way to setup a scalable development ide and web server
  • Adding a commercial SSL certificate to a Digital Ocean VM

Go to https://make.wordpress.org/cli/handbook/installing/ and read the install instructions.

How to install wp-cli on Ubuntu

First read this post too install WordPress from the command line. You should install WordPress here.

Telnet to your server (SSH)

cd /www
mkdir wp-cli
cd wp-cli
pwd
/www/wp-cli
curl -O https://raw.githubusercontent.com/wp-cli/builds/gh-pages/phar/wp-cli.phar
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 4191k  100 4191k    0     0  4535k      0 --:--:-- --:--:-- --:--:-- 4536k

Did the file download?

ls wp-cli.phar -al
-rw-r--r-- 1 root root 4292472 Sep 10 13:29 wp-cli.phar

Execute

/usr/bin/php ./wp-cli.phar --info

Make the file executable and move it to /usr/local/bin/wp

chmod +x wp-cli.phar
sudo mv wp-cli.phar /usr/local/bin/wp

Now you can run wp-cli by typing the following from the command line

wp --info

Read the official wp-cli quick start guide https://make.wordpress.org/cli/handbook/quick-start/

Ever since I moved my WordPress to a self-managed server I have not been able to update my plugins and I have not installed an  FTP server (by choice for security reasons).

Wordpress manual update plugins page

Let’s see if we can update plugin with wp-cli

cd /www
wp plugin update --all

Yes, it worked

Enabling Maintenance mode...
Downloading update from https://downloads.wordpress.org/plugin/add-to-any.1.7.17.zip...
Unpacking the update...
Installing the latest version...
Removing the old version of the plugin...
Plugin updated successfully.
Downloading update from https://downloads.wordpress.org/plugin/contact-form-7.4.9.zip...
Unpacking the update...
Installing the latest version...
Removing the old version of the plugin...
Plugin updated successfully.
Downloading update from https://downloads.wordpress.org/plugin/ewww-image-optimizer.3.6.1.zip...
Downloading update from https://downloads.wordpress.org/plugin/ewww-image-optimizer.3.6.1.zip...
Unpacking the update...
Installing the latest version...
Removing the old version of the plugin...
Plugin updated successfully.
Downloading update from https://downloads.wordpress.org/plugin/ewww-image-optimizer-cloud.3.6.1.zip...
Unpacking the update...
Installing the latest version...
Removing the old version of the plugin...
Plugin updated successfully.
Downloading update from https://downloads.wordpress.org/plugin/better-wp-security.6.6.0.zip...
Unpacking the update...
Installing the latest version...
Removing the old version of the plugin...
Plugin updated successfully.
Downloading update from https://www.wponlinesupport.com/edd-sl/package_download/removedapikey...
Warning: Download failed. "Unauthorized"
Downloading update from https://downloads.wordpress.org/plugin/wordpress-seo.5.4.zip...
Unpacking the update...
Installing the latest version...
Removing the old version of the plugin...
Plugin updated successfully.
Disabling Maintenance mode...
+----------------------------+-------------+-------------+---------+
| name                       | old_version | new_version | status  |
+----------------------------+-------------+-------------+---------+
| add-to-any                 | 1.7.16      | 1.7.17      | Updated |
| contact-form-7             | 4.8.1       | 4.9         | Updated |
| ewww-image-optimizer       | 3.5.1       | 3.6.1       | Updated |
| ewww-image-optimizer-cloud | 3.5.1       | 3.6.1       | Updated |
| better-wp-security         | 6.3.0       | 6.6.0       | Updated |
| wp-news-and-widget-pro     | 1.1.9       | 2.1.1       | Updated |
| wordpress-seo              | 5.1         | 5.4         | Updated |
+----------------------------+-------------+-------------+---------+
Success: Updated 7 of 7 plugins.

I have now updated all active plugins from one command line.

WordPress Plugins

I have been unable to update WordPress itself since I moved my website (without an FTP server).

Update WordPress

Let’s try and update WordPress with wp-cli.

Run this command.

cd /www
sudo wp core update

Success

Updating to version 4.8.1 (en_US)...
Downloading update from https://downloads.wordpress.org/release/wordpress-4.8.1-no-content.zip...
Unpacking the update...
Success: WordPress updated successfully.

WordPress version

Awesome 🙂

Now time to create a few executable bash files to update plugins and WordPress files in future.

Update WordPress Plugins Bash Script

sudo nano /scripts/updatewordpressplugins.sh

Contents

#!/bin/bash
cd /www
wp plugin update --all

Make Executable

chmod +X /scripts/updatewordpressplugins.sh

Update WordPress Bash Script

sudo nano /scripts/updatewordpress.sh

Contents

!/bin/bash
cd /www
sudo wp core update

Make Executable

chmod +X /scripts/updatewordpress.sh

More Commands

More commands can be found here: https://developer.wordpress.org/cli/commands/

Information on exporting tables can be found here https://developer.wordpress.org/cli/commands/db/export/

Site Wide Search and Replace

wp search-replace 'http://fearby.com' 'https://fearby.com' --dry-run

Results

+------------------+-----------------------+--------------+------+
| Table            | Column                | Replacements | Type |
+------------------+-----------------------+--------------+------+
| wp_commentmeta   | meta_key              | 0            | SQL  |
| wp_commentmeta   | meta_value            | 0            | SQL  |
| wp_comments      | comment_author        | 0            | SQL  |
| wp_comments      | comment_author_email  | 0            | SQL  |
| wp_comments      | comment_author_url    | 72           | SQL  |
| wp_comments      | comment_author_IP     | 0            | SQL  |
| wp_comments      | comment_content       | 0            | SQL  |
| wp_comments      | comment_approved      | 0            | SQL  |
| wp_comments      | comment_agent         | 0            | SQL  |
| wp_comments      | comment_type          | 0            | SQL  |
| wp_links         | link_url              | 0            | SQL  |
| wp_links         | link_name             | 0            | SQL  |
| wp_links         | link_image            | 0            | SQL  |
| wp_links         | link_target           | 0            | SQL  |
| wp_links         | link_description      | 0            | SQL  |
| wp_links         | link_visible          | 0            | SQL  |
| wp_links         | link_rel              | 0            | SQL  |
| wp_links         | link_notes            | 0            | SQL  |
| wp_links         | link_rss              | 0            | SQL  |
| wp_options       | option_name           | 0            | SQL  |
| wp_options       | option_value          | 10           | PHP  |
| wp_options       | autoload              | 0            | SQL  |
| wp_postmeta      | meta_key              | 0            | SQL  |
| wp_postmeta      | meta_value            | 56           | PHP  |
| wp_posts         | post_content          | 2176         | SQL  |
| wp_posts         | post_title            | 0            | SQL  |
| wp_posts         | post_excerpt          | 0            | SQL  |
| wp_posts         | post_status           | 0            | SQL  |
| wp_posts         | comment_status        | 0            | SQL  |
| wp_posts         | ping_status           | 0            | SQL  |
| wp_posts         | post_password         | 0            | SQL  |
| wp_posts         | post_name             | 0            | SQL  |
| wp_posts         | to_ping               | 0            | SQL  |
| wp_posts         | pinged                | 26           | SQL  |
| wp_posts         | post_content_filtered | 0            | SQL  |
| wp_posts         | guid                  | 3928         | SQL  |
| wp_posts         | post_type             | 0            | SQL  |
| wp_posts         | post_mime_type        | 0            | SQL  |
| wp_term_taxonomy | taxonomy              | 0            | SQL  |
| wp_term_taxonomy | description           | 0            | SQL  |
| wp_termmeta      | meta_key              | 0            | SQL  |
| wp_termmeta      | meta_value            | 0            | SQL  |
| wp_terms         | name                  | 0            | SQL  |
| wp_terms         | slug                  | 0            | SQL  |
| wp_usermeta      | meta_key              | 0            | SQL  |
| wp_usermeta      | meta_value            | 0            | PHP  |
| wp_users         | user_login            | 0            | SQL  |
| wp_users         | user_nicename         | 0            | SQL  |
| wp_users         | user_email            | 0            | SQL  |
| wp_users         | user_url              | 0            | SQL  |
| wp_users         | user_activation_key   | 0            | SQL  |
| wp_users         | display_name          | 0            | SQL  |
+------------------+-----------------------+--------------+------+
Success: 6268 replacements to be made.

If you are updating past pages and post links do include https look for www alos

wp search-replace 'http://www.fearby.com' 'https://www.fearby.com' --dry-run
+------------------+-----------------------+--------------+------+
| Table            | Column                | Replacements | Type |
+------------------+-----------------------+--------------+------+
| wp_commentmeta   | meta_key              | 0            | SQL  |
| wp_commentmeta   | meta_value            | 0            | SQL  |
| wp_comments      | comment_author        | 0            | SQL  |
| wp_comments      | comment_author_email  | 0            | SQL  |
| wp_comments      | comment_author_url    | 0            | SQL  |
| wp_comments      | comment_author_IP     | 0            | SQL  |
| wp_comments      | comment_content       | 0            | SQL  |
| wp_comments      | comment_approved      | 0            | SQL  |
| wp_comments      | comment_agent         | 0            | SQL  |
| wp_comments      | comment_type          | 0            | SQL  |
| wp_links         | link_url              | 0            | SQL  |
| wp_links         | link_name             | 0            | SQL  |
| wp_links         | link_image            | 0            | SQL  |
| wp_links         | link_target           | 0            | SQL  |
| wp_links         | link_description      | 0            | SQL  |
| wp_links         | link_visible          | 0            | SQL  |
| wp_links         | link_rel              | 0            | SQL  |
| wp_links         | link_notes            | 0            | SQL  |
| wp_links         | link_rss              | 0            | SQL  |
| wp_options       | option_name           | 0            | SQL  |
| wp_options       | option_value          | 1            | PHP  |
| wp_options       | autoload              | 0            | SQL  |
| wp_postmeta      | meta_key              | 0            | SQL  |
| wp_postmeta      | meta_value            | 42           | PHP  |
| wp_posts         | post_content          | 729          | SQL  |
| wp_posts         | post_title            | 3            | SQL  |
| wp_posts         | post_excerpt          | 0            | SQL  |
| wp_posts         | post_status           | 0            | SQL  |
| wp_posts         | comment_status        | 0            | SQL  |
| wp_posts         | ping_status           | 0            | SQL  |
| wp_posts         | post_password         | 0            | SQL  |
| wp_posts         | post_name             | 0            | SQL  |
| wp_posts         | to_ping               | 0            | SQL  |
| wp_posts         | pinged                | 10           | SQL  |
| wp_posts         | post_content_filtered | 0            | SQL  |
| wp_posts         | guid                  | 0            | SQL  |
| wp_posts         | post_type             | 0            | SQL  |
| wp_posts         | post_mime_type        | 0            | SQL  |
| wp_term_taxonomy | taxonomy              | 0            | SQL  |
| wp_term_taxonomy | description           | 0            | SQL  |
| wp_termmeta      | meta_key              | 0            | SQL  |
| wp_termmeta      | meta_value            | 0            | SQL  |
| wp_terms         | name                  | 0            | SQL  |
| wp_terms         | slug                  | 0            | SQL  |
| wp_usermeta      | meta_key              | 0            | SQL  |
| wp_usermeta      | meta_value            | 0            | PHP  |
| wp_users         | user_login            | 0            | SQL  |
| wp_users         | user_nicename         | 0            | SQL  |
| wp_users         | user_email            | 0            | SQL  |
| wp_users         | user_url              | 0            | SQL  |
| wp_users         | user_activation_key   | 0            | SQL  |
| wp_users         | display_name          | 0            | SQL  |
+------------------+-----------------------+--------------+------+

When you are ready to run the replace remove the

--dry-run

As always, backup your database and files before you make changes.

Success: Made 6270 replacements.
Success: Made 787 replacements.

This was the easiest way to update my WordPress site and force existing links use https links.  Of course, you can downgrade https links if you don’t want to have https anymore.

Troubleshooting

wp needs to be run from the root folder of your web server (or it will report an error). You can specify a path location as a parameter  too ( –path=’/path/to/wordpress’)

Error: This does not seem to be a WordPress install.

All the following the wp command if you are logged in as root (not recommended for security reasons).

--allow-root

Adding “Advertisement” text above Google ads in all WordPress pages and posts, read this guide on setting up AdSense on your blog (unless you go Auto Ads).

sudo wp search-replace '<script async src="//pagead2.googlesyndication.com' 'Advertisement:<br /> <script async="" src="//pagead2.googlesyndication.com'
sudo wp search-replace '<script async="" src="//pagead2.googlesyndication.com' 'Advertisement:<br /> <script async="" src="//pagead2.googlesyndication.com'

Official Troubleshooting guide here

I had an issue where I received error messages running the wp tool, iI fixed this editing my php.ini file and changing this..

memory_limit = 128

to

memory_limit = 128M

The M made all the difference after I restarted PHP/NGINX.

to this

Thank You, Kerry Hoath for the tip on this awesome cli tool.

fyi: WordPress fixed a SQL injection vulnerability and the wp-cli tool helped me update WordPress from the CLI.

Update Themes

sudo wp theme update --all --allow-root

Update Plugins

sudo wp plugins update --all --allow-root

Update WordPress Core

sudo wp core update --allow-root

Donate and make this blog better




Ask a question or recommend an article
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v1.5 Updating WordPress themes, plugins or core

v1.42 added ‘cd /www’ before calling wp cli.

Filed Under: Advice, CPI, Tech Advice, VM, Website, Wordpress Tagged With: command, core, Interface, line, plugins, theme, wordpress

Securing Ubuntu in the cloud

August 9, 2017 by Simon

It is easy to deploy servers to the cloud within a few minutes, you can have a cloud-based server that you (or others can use). ubuntu has a great guide on setting up basic security issues but what do you need to do.

If you do not secure your server expects it to be hacked into. Below are tips on securing your cloud server.

First, read more on scanning your server with Lynis security scan.

Always use up to date software

Always use update software, malicious users can detect what software you use with sites like shodan.io (or use port scan tools) and then look for weaknesses from well-published lists (e.g WordPress, Windows, MySQL, node, LifeRay, Oracle etc). People can even use Google to search for login pages or sites with passwords in HTML (yes that simple).  Once a system is identified by a malicious user they can send automated bots to break into your site (trying millions of passwords a day) or use tools to bypass existing defences (Security researcher Troy Hunt found out it’s child’s play).

Portscan sites like https://mxtoolbox.com/SuperTool.aspx?action=scan are good for knowing what you have exposed.

You can also use local programs like nmap to view open ports

Instal nmap

sudo apt-get install nmap

Find open ports

nmap -v -sT localhost

Starting Nmap 7.01 ( https://nmap.org ) at 2017-08-08 23:57 AEST
Initiating Connect Scan at 23:57
Scanning localhost (127.0.0.1) [1000 ports]
Discovered open port 80/tcp on 127.0.0.1
Discovered open port 3306/tcp on 127.0.0.1
Discovered open port 22/tcp on 127.0.0.1
Discovered open port 9101/tcp on 127.0.0.1
Discovered open port 9102/tcp on 127.0.0.1
Discovered open port 9103/tcp on 127.0.0.1
Completed Connect Scan at 23:57, 0.05s elapsed (1000 total ports)
Nmap scan report for localhost (127.0.0.1)
Host is up (0.00020s latency).
Not shown: 994 closed ports
PORT     STATE SERVICE
22/tcp   open  ssh
80/tcp   open  http
3306/tcp open  mysql
9101/tcp open  jetdirect
9102/tcp open  jetdirect
9103/tcp open  jetdirect

Read data files from: /usr/bin/../share/nmap
Nmap done: 1 IP address (1 host up) scanned in 0.17 seconds
           Raw packets sent: 0 (0B) | Rcvd: 0 (0B)

Limit ssh connections

Read more here.

Use ufw to set limits on login attempts

sudo ufw limit ssh comment 'Rate limit hit for openssh server'

Only allow known IP’s access to your valuable ports

sudo ufw allow from 123.123.123.123/32 to any port 22

Delete unwanted firewall rules

sudo ufw status numbered
sudo ufw delete 8

Only allow known IP’s to certain ports

sudo ufw allow from 123.123.123.123 to any port 80/tcp

Also, set outgoing traffic to known active servers and ports

sudo ufw allow out from 123.123.123.123 to any port 22

Don’t use weak/common Diffie-Hellman key for SSL certificates, more information here.

openssl req -new -newkey rsa:4096 -nodes -keyout server.key -out server.csr
 
Generating a 4096 bit RSA private key
...

More info on generating SSL certs here and setting here and setting up Public Key Pinning here.

Intrusion Prevention Software

Do run fail2ban: Guide here https://www.linode.com/docs/security/using-fail2ban-for-security

I use iThemes Security to secure my WordPress and block repeat failed logins from certain IP addresses.

iThemes Security can even lock down your WordPress.

You can set iThemes to auto lock out users on x failed logins

Remember to use allowed whitelists though (it is so easy to lock yourself out of servers).

Passwords

Do have strong passwords and change the root password provided by the hosts. https://howsecureismypassword.net/ is a good site to see how strong your password is from brute force password attempts. https://www.grc.com/passwords.htm is a good site to obtain a strong password.  Do follow Troy Hunt’s blog and twitter account to keep up to date with security issues.

Configure a Firewall Basics

You should install a firewall on your Ubuntu and configure it and also configure a firewall with your hosts (e.g AWS, Vultr, Digital Ocean).

Configure a Firewall on AWS

My AWS server setup guide here. AWS allow you to configure the firewall here in the Amazon Console.

Type Protocol Port Range Source Comment
HTTP TCP 80 0.0.0.0/0 Opens a web server port for later
All ICMP ALL N/A 0.0.0.0/0 Allows you to ping
All traffic ALL All 0.0.0.0/0 Not advisable long term but OK for testing today.
SSH TCP 22 0.0.0.0/0 Not advisable, try and limit this to known IP’s only.
HTTPS TCP 443 0.0.0.0/0 Opens a secure web server port for later

Configure a Firewall on Digital Ocean

Configuring a firewall on Digital Ocean (create a $5/m server here).  You can configure your Digital Ocean droplet firewall by clicking Droplet, Networking then Manage Firewall after logging into Digital Ocean.

Configure a Firewall on Vultr

Configuring a firewall on Vultr (create a $2.5/m server here).

Don’t forget to set IP rules for IPV4 and IPV6, Only set the post you need to allow and ensure applications have strong passwords.

Ubuntu has a firewall built in (documentation).

sudo ufw status

Enable the firewall

sudo ufw enable

Adding common ports

sudo ufw allow ssh/tcp
sudo ufw logging on
sudo ufw allow 22
sudo ufw allow 80
sudo ufw allow 53
sudo ufw allow 443
sudo ufw allow 873
sudo ufw enable
sudo ufw status
sudo ufw allow http
sudo ufw allow https

Add a whitelist for your IP (use http://icanhazip.com/ to get your IP) to ensure you won’t get kicked out of your server.

sudo ufw allow from 123.123.123.123/24 to any port 22

More help here.  Here is a  good guide on ufw commands. Info on port numbers here.

https://en.wikipedia.org/wiki/List_of_TCP_and_UDP_port_numbers

If you don’t have a  Digital Ocean server for $5 a month click here and if a $2.5 a month Vultr server here.

Backups

rsync is a good way to copy files to another server or use Bacula

sudo apt install bacula

Basics

Initial server setup guide (Digital Ocean).

Sudo (admin user)

Read this guide on the Linux sudo command (the equivalent if run as administrator on Windows).

Users

List users on an Ubuntu OS (or compgen -u)

cut -d: -f1 /etc/passwd

Common output

cut -d: -f1 /etc/passwd
root
daemon
bin
sys
sync
games
man
lp
mail
news
uucp
proxy
www-data
backup
list
irc
gnats
nobody
systemd-timesync
systemd-network
systemd-resolve
systemd-bus-proxy
syslog
_apt
lxd
messagebus
uuidd
dnsmasq
sshd
pollinate
ntp
mysql
clamav

Add User

sudo adduser new_username

e.g

sudo adduser bob
Adding user `bob' ...
Adding new group `bob' (1000) ...
Adding new user `bob' (1000) with group `bob' ...
Creating home directory `/home/bob' ...
etc..

Add user to a group

sudo usermod -a -G MyGroup bob

Show users in a group

getent group MyGroup | awk -F: '{print $4}'

This will show users in a group

Remove a user

sudo userdel username
sudo rm -r /home/username

Rename user

usermod -l new_username old_username

Change user password

sudo passwd username

Groups

Show all groups

compgen -ug

Common output

compgen -g
root
daemon
bin
sys
adm
tty
disk
lp
mail
proxy
sudo
www-data
backup
irc
etc

You can create your own groups but first, you must be aware of group ids

cat /etc/group

Then you can see your systems groups and ids.

Create a group

groupadd -g 999 MyGroup

Permissions

Read this https://help.ubuntu.com/community/FilePermissions

How to list users on Ubuntu.

Read more on setting permissions here.

Chmod help can be found here.

Install Fail2Ban

I used this guide on installing Fail2Ban.

apt-get install fail2ban

Check Fail2Ban often and add blocks to the firewall of known bad IPs

fail2ban-client status

Best practices

Ubuntu has a guide on basic security setup here.

Startup Processes

It is a good idea to review startup processes from time to time.

sudo apt-get install rcconf
sudo rcconf

Accounts

  • Read up on the concept of least privilege access for apps and services here.
  • Read up on chmod permissions.

Updates

Do update your operating system often.

sudo apt-get update
sudo apt-get upgrade

Minimal software

Only install what software you need

Exploits and Keeping up to date

Do keep up to date with exploits and vulnerabilities

  • Follow 0xDUDE on twitter.
  • Read the GDI.Foundation page.
  • Visit the Exploit Database
  • Vulnerability & Exploit Database
  • Subscribe to the Security Now podcast.

Secure your applications

  • NodeJS: Enable logging in applications you install or develop.

Ban repeat Login attempts with FailBan

Fail2Ban config

sudo nano /etc/fail2ban/jail.conf
[sshd]

enabled  = true
port     = ssh
filter   = sshd
logpath  = /var/log/auth.log
maxretry = 3

Hosts File Hardening

sudo nano /etc/host.conf

Add

order bind,hosts
nospoof on

Add a whitelist with your ip on /etc/fail2ban/jail.conf (see this)

[DEFAULT]
# "ignoreip" can be an IP address, a CIDR mask or a DNS host. Fail2ban will not                          
# ban a host which matches an address in this list. Several addresses can be                             
# defined using space separator.
                                                                         
ignoreip = 127.0.0.1 192.168.1.0/24 8.8.8.8

Restart the service

sudo service fail2ban restart
sudo service fail2ban status

Intrusion detection (logging) systems

Tripwire will not block or prevent intrusions but it will log and give you a heads up with risks and things of concern

Install Tripwire.

sudo apt-get install tiger tripwire

Running Tripwire

sudo tiger

This will scan your system for issues of note

sudo tiger
Tiger UN*X security checking system
   Developed by Texas A&M University, 1994
   Updated by the Advanced Research Corporation, 1999-2002
   Further updated by Javier Fernandez-Sanguino, 2001-2015
   Contributions by Francisco Manuel Garcia Claramonte, 2009-2010
   Covered by the GNU General Public License (GPL)

Configuring...

Will try to check using config for 'x86_64' running Linux 4.4.0-89-generic...
--CONFIG-- [con005c] Using configuration files for Linux 4.4.0-89-generic. Using
           configuration files for generic Linux 4.
Tiger security scripts *** 3.2.3, 2008.09.10.09.30 ***
20:42> Beginning security report for simon.
20:42> Starting file systems scans in background...
20:42> Checking password files...
20:42> Checking group files...
20:42> Checking user accounts...
20:42> Checking .rhosts files...
20:42> Checking .netrc files...
20:42> Checking ttytab, securetty, and login configuration files...
20:42> Checking PATH settings...
20:42> Checking anonymous ftp setup...
20:42> Checking mail aliases...
20:42> Checking cron entries...
20:42> Checking 'services' configuration...
20:42> Checking NFS export entries...
20:42> Checking permissions and ownership of system files...
--CONFIG-- [con010c] Filesystem 'fuse.lxcfs' used by 'lxcfs' is not recognised as a valid filesystem
20:42> Checking for indications of break-in...
--CONFIG-- [con010c] Filesystem 'fuse.lxcfs' used by 'lxcfs' is not recognised as a valid filesystem
20:42> Performing rootkit checks...
20:42> Performing system specific checks...
20:46> Performing root directory checks...
20:46> Checking for secure backup devices...
20:46> Checking for the presence of log files...
20:46> Checking for the setting of user's umask...
20:46> Checking for listening processes...
20:46> Checking SSHD's configuration...
20:46> Checking the printers control file...
20:46> Checking ftpusers configuration...
20:46> Checking NTP configuration...
20:46> Waiting for filesystems scans to complete...
20:46> Filesystems scans completed...
20:46> Performing check of embedded pathnames...
20:47> Security report completed for simon.
Security report is in `/var/log/tiger/security.report.simon.170809-20:42'.

My Output.

sudo nano /var/log/tiger/security.report.username.170809-18:42

Security scripts *** 3.2.3, 2008.09.10.09.30 ***
Wed Aug  9 18:42:24 AEST 2017
20:42> Beginning security report for username (x86_64 Linux 4.4.0-89-generic).

# Performing check of passwd files...
# Checking entries from /etc/passwd.
--WARN-- [pass014w] Login (bob) is disabled, but has a valid shell.
--WARN-- [pass014w] Login (root) is disabled, but has a valid shell.
--WARN-- [pass015w] Login ID sync does not have a valid shell (/bin/sync).
--WARN-- [pass012w] Home directory /nonexistent exists multiple times (3) in
         /etc/passwd.
--WARN-- [pass012w] Home directory /run/systemd exists multiple times (2) in
         /etc/passwd.
--WARN-- [pass006w] Integrity of password files questionable (/usr/sbin/pwck
         -r).

# Performing check of group files...

# Performing check of user accounts...
# Checking accounts from /etc/passwd.
--WARN-- [acc021w] Login ID dnsmasq appears to be a dormant account.
--WARN-- [acc022w] Login ID nobody home directory (/nonexistent) is not
         accessible.

# Performing check of /etc/hosts.equiv and .rhosts files...

# Checking accounts from /etc/passwd...

# Performing check of .netrc files...

# Checking accounts from /etc/passwd...

# Performing common access checks for root (in /etc/default/login, /securetty, and /etc/ttytab...
--WARN-- [root001w] Remote root login allowed in /etc/ssh/sshd_config

# Performing check of PATH components...
--WARN-- [path009w] /etc/profile does not export an initial setting for PATH.
# Only checking user 'root'

# Performing check of anonymous FTP...

# Performing checks of mail aliases...
# Checking aliases from /etc/aliases.

# Performing check of `cron' entries...
--WARN-- [cron005w] Use of cron is not restricted

# Performing check of 'services' ...
# Checking services from /etc/services.
--WARN-- [inet003w] The port for service ssmtp is also assigned to service
         urd.
--WARN-- [inet003w] The port for service pipe-server is also assigned to
         service search.

# Performing NFS exports check...

# Performing check of system file permissions...
--ALERT-- [perm023a] /bin/su is setuid to `root'.
--ALERT-- [perm023a] /usr/bin/at is setuid to `daemon'.
--ALERT-- [perm024a] /usr/bin/at is setgid to `daemon'.
--WARN-- [perm001w] The owner of /usr/bin/at should be root (owned by daemon).
--WARN-- [perm002w] The group owner of /usr/bin/at should be root.
--ALERT-- [perm023a] /usr/bin/passwd is setuid to `root'.
--ALERT-- [perm024a] /usr/bin/wall is setgid to `tty'.

# Checking for known intrusion signs...
# Testing for promiscuous interfaces with /bin/ip
# Testing for backdoors in inetd.conf

# Performing check of files in system mail spool...

# Performing check for rookits...
# Running chkrootkit (/usr/sbin/chkrootkit) to perform further checks...
--WARN-- [rootkit004w] Chkrootkit has detected a possible rootkit installation
Possible Linux/Ebury - Operation Windigo installetd

# Performing system specific checks...
# Performing checks for Linux/4...

# Checking boot loader file permissions...
--WARN-- [boot02] The configuration file /boot/grub/menu.lst has group
         permissions. Should be 0600
--FAIL-- [boot02] The configuration file /boot/grub/menu.lst has world
         permissions. Should be 0600
--WARN-- [boot06] The Grub bootloader does not have a password configured.

# Checking for vulnerabilities in inittab configuration...

# Checking for correct umask settings for init scripts...
--WARN-- [misc021w] There are no umask entries in /etc/init.d/rcS

# Checking Logins not used on the system ...

# Checking network configuration
--FAIL-- [lin013f] The system is not protected against Syn flooding attacks
--WARN-- [lin017w] The system is not configured to log suspicious (martian)
         packets

# Verifying system specific password checks...

# Checking OS release...
--WARN-- [osv004w] Unreleased Debian GNU/Linux version `stretch/sid'

# Checking installed packages vs Debian Security Advisories...

# Checking md5sums of installed files

# Checking installed files against packages...
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.dep' does not
         belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.alias.bin' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.devname' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.softdep' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.alias' does not
         belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.symbols.bin'
         does not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.builtin.bin'
         does not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.symbols' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-87-generic/modules.dep.bin' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.dep' does not
         belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.alias.bin' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.devname' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.softdep' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.alias' does not
         belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.symbols.bin'
         does not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.builtin.bin'
         does not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.symbols' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/modules/4.4.0-89-generic/modules.dep.bin' does
         not belong to any package.
--WARN-- [lin001w] File `/lib/udev/hwdb.bin' does not belong to any package.

# Performing check of root directory...

# Checking device permissions...
--WARN-- [dev003w] The directory /dev/block resides in a device directory.
--WARN-- [dev003w] The directory /dev/char resides in a device directory.
--WARN-- [dev003w] The directory /dev/cpu resides in a device directory.
--FAIL-- [dev002f] /dev/fuse has world permissions
--WARN-- [dev003w] The directory /dev/hugepages resides in a device directory.
--FAIL-- [dev002f] /dev/kmsg has world permissions
--WARN-- [dev003w] The directory /dev/lightnvm resides in a device directory.
--WARN-- [dev003w] The directory /dev/mqueue resides in a device directory.
--FAIL-- [dev002f] /dev/rfkill has world permissions
--WARN-- [dev003w] The directory /dev/vfio resides in a device directory.

# Checking for existence of log files...
--FAIL-- [logf005f] Log file /var/log/btmp permission should be 660
--FAIL-- [logf007f] Log file /var/log/messages does not exist

# Checking for correct umask settings for user login shells...
--WARN-- [misc021w] There is no umask definition for the dash shell
--WARN-- [misc021w] There is no umask definition for the bash shell

# Checking symbolic links...

# Performing check of embedded pathnames...
20:47> Security report completed for username.

More on Tripwire here.

Hardening PHP

Hardening PHP config (and backing the PHP config it up), first create an info.php file in your website root folder with this info

<?php
phpinfo()
?>

Now look for what PHP file is loadingPHP Config

Back that your PHP config file

TIP: Delete the file with phpinfo() in it as it is a security risk to leave it there.

TIP: Read the OWASP cheat sheet on using PHP securely here and securing php.ini here.

Some common security changes

file_uploads = On
expose_php = Off
error_reporting = E_ALL
display_errors          = Off
display_startup_errors  = Off
log_errors              = On
error_log = /php_errors.log
ignore_repeated_errors  = Off

Don’t forget to review logs, more config changes here.

Antivirus

Yes, it is a good idea to run antivirus in Ubuntu, here is a good list of antivirus software

I am installing ClamAV as it can be installed on the command line and is open source.

sudo apt-get install clamav

ClamAV help here.

Scan a folder

sudo clamscan --max-filesize=3999M --max-scansize=3999M --exclude-dir=/www/* -i -r /

Setup auto-update antivirus definitions

sudo dpkg-reconfigure clamav-freshclam

I set auto updates 24 times a day (every hour) via daemon updates.

tip: Download manual antivirus update definitions. If you only have a 512MB server your update may fail and you may want to stop fresh claim/php/nginx and mysql before you update to ensure the antivirus definitions update. You can move this to a con job and set this to update at set times over daemon to ensure updates happen.

sudo /etc/init.d/clamav-freshclam stop

sudo service php7.0-fpm stop
sudo /etc/init.d/nginx stop
sudo /etc/init.d/mysql stop

sudo freshclam -v
Current working dir is /var/lib/clamav
Max retries == 5
ClamAV update process started at Tue Aug  8 22:22:02 2017
Using IPv6 aware code
Querying current.cvd.clamav.net
TTL: 1152
Software version from DNS: 0.99.2
Retrieving http://db.au.clamav.net/main.cvd
Trying to download http://db.au.clamav.net/main.cvd (IP: 193.1.193.64)
Downloading main.cvd [100%]
Loading signatures from main.cvd
Properly loaded 4566249 signatures from new main.cvd
main.cvd updated (version: 58, sigs: 4566249, f-level: 60, builder: sigmgr)
Querying main.58.82.1.0.C101C140.ping.clamav.net
Retrieving http://db.au.clamav.net/daily.cvd
Trying to download http://db.au.clamav.net/daily.cvd (IP: 193.1.193.64)
Downloading daily.cvd [100%]
Loading signatures from daily.cvd
Properly loaded 1742284 signatures from new daily.cvd
daily.cvd updated (version: 23644, sigs: 1742284, f-level: 63, builder: neo)
Querying daily.23644.82.1.0.C101C140.ping.clamav.net
Retrieving http://db.au.clamav.net/bytecode.cvd
Trying to download http://db.au.clamav.net/bytecode.cvd (IP: 193.1.193.64)
Downloading bytecode.cvd [100%]
Loading signatures from bytecode.cvd
Properly loaded 66 signatures from new bytecode.cvd
bytecode.cvd updated (version: 308, sigs: 66, f-level: 63, builder: anvilleg)
Querying bytecode.308.82.1.0.C101C140.ping.clamav.net
Database updated (6308599 signatures) from db.au.clamav.net (IP: 193.1.193.64)

sudo service php7.0-fpm restart
sudo /etc/init.d/nginx restart
sudo /etc/init.d/mysql restart 

sudo /etc/init.d/clamav-freshclam start

Manual scan with a bash script

Create a bash script

mkdir /script
sudo nano /scripts/updateandscanav.sh

# Include contents below.
# Save and quit

chmod +X /scripts/updateandscanav.sh

Bash script contents to update antivirus definitions.

sudo /etc/init.d/clamav-freshclam stop

sudo service php7.0-fpm stop
sudo /etc/init.d/nginx stop
sudo /etc/init.d/mysql stop

sudo freshclam -v

sudo service php7.0-fpm restart
sudo /etc/init.d/nginx restart
sudo /etc/init.d/mysql restart

sudo /etc/init.d/clamav-freshclam start

sudo clamscan --max-filesize=3999M --max-scansize=3999M -v -r /

Edit the crontab to run the script every hour

crontab -e
1 * * * * /bin/bash /scripts/updateandscanav.sh > /dev/null 2>&1

Uninstalling Clam AV

You may need to uninstall Clamav if you don’t have a lot of memory or find updates are too big.

sudo apt-get remove --auto-remove clamav
sudo apt-get purge --auto-remove clamav

Setup Unattended Ubuntu Security updates

sudo apt-get install unattended-upgrades
sudo unattended-upgrades -d

At login, you should receive

0 updates are security updates.

Other

  • Read this awesome guide.
  • install Fail2Ban
  • Do check your log files if you suspect suspicious activity.

Check out the extensive Hardening a Linux Server guide at thecloud.org.uk: https://thecloud.org.uk/wiki/index.php?title=Hardening_a_Linux_Server

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